[Methods]Accessing Ensembl annotation with biomaRt

Mike L. Smith, Steffen Durinck, Wolfgang Huber 12 August 2021 Package: biomaRt 2.49.4 introduction By far, the biomaRt package is the most commonly used to access the data available in Ensembl. With this in mind, biomaRt provides many features customized specifically for the biomaRt instance provided by Ensembl. This article details t ...

Posted by Imperialoutpost on Fri, 08 Oct 2021 20:53:49 +0200

Detailed explanation of edit distance and its code implementation

summary The Minimum Edit Distance (MED) was proposed by Vladimir Levenshtein, a Russian scientist, in 1965, hence the name Levenshtein Distance. Levenshtein Distance is an index used to measure the similarity of two sequences in the fields of information theory, linguistics and computer science. Generally speaking, editing distance refers t ...

Posted by ferronrsmith on Tue, 05 Oct 2021 01:12:22 +0200